Package: samr 3.0.1

samr: SAM: Significance Analysis of Microarrays

Significance Analysis of Microarrays for differential expression analysis, RNAseq data and related problems.

Authors:Rob Tibshirani [aut, cre], Michael J. Seo [aut], G. Chu [aut], Balasubramanian Narasimhan [aut], Jun Li [aut]

samr_3.0.1.tar.gz
samr_3.0.1.zip(r-4.7)samr_3.0.1.zip(r-4.6)samr_3.0.1.zip(r-4.5)
samr_3.0.1.tgz(r-4.6-x86_64)samr_3.0.1.tgz(r-4.6-arm64)samr_3.0.1.tgz(r-4.5-x86_64)samr_3.0.1.tgz(r-4.5-arm64)
samr_3.0.1.tar.gz(r-4.7-arm64)samr_3.0.1.tar.gz(r-4.7-x86_64)samr_3.0.1.tar.gz(r-4.6-arm64)samr_3.0.1.tar.gz(r-4.6-x86_64)
samr_3.0.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
samr/json (API)

# Install 'samr' in R:
install.packages('samr', repos = c('https://tibshirani.r-universe.dev', 'https://cloud.r-project.org'))

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

5.36 score 3 stars 1 packages 270 scripts 1.9k downloads 114 mentions 29 exports 42 dependencies

Last updated from:a2150318dd. Checks:13 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK152
linux-devel-x86_64OK154
source / vignettesOK179
linux-release-arm64OK139
linux-release-x86_64OK180
macos-release-arm64OK194
macos-release-x86_64OK278
macos-oldrel-arm64OK211
macos-oldrel-x86_64OK241
windows-develOK123
windows-releaseOK97
windows-oldrelOK115
wasm-releaseOK105

Exports:check.formatplot.SAMoutputprint.SAMoutputquantitative.funcrunSAMSAMsamrsamr.assess.samplesizesamr.assess.samplesize.plotsamr.compute.delta.tablesamr.compute.siggenes.tablesamr.const.multiclass.responsesamr.const.oneclass.responsesamr.const.oneclass.timecourse.responsesamr.const.patterndiscovery.responsesamr.const.quantitative.responsesamr.const.survival.responsesamr.const.twoclass.paired.responsesamr.const.twoclass.paired.timecourse.responsesamr.const.twoclass.unpaired.responsesamr.const.twoclass.unpaired.timecourse.responsesamr.estimate.depthsamr.missratesamr.norm.datasamr.plotsamr.pvalues.from.permssamr.tail.strengthSAMseqttest.func

Dependencies:base64encbslibcachemclicommonmarkdigestfastmapfontawesomefsglueGSAhtmltoolshttpuvimputejquerylibjsonlitelaterlifecyclemagrittrmatrixStatsmemoisemimeopenxlsxotelpillarpkgconfigpromisesR6rappdirsRcpprlangsassshinyshinyFilessourcetoolsstringitibbleutf8vctrswithrxtablezip